FromTim OsbornDateThu, 29 Sep 2005 09:20:00 +0100
ToPhil Jones, Eystein Jansen, Jonathan T. Overpeck
CCKeith Briffa
SubjectMcIntyre and D'Arrigo et al (submitted)

Dear Phil, Eystein and Peck,

I've already talked about this to Phil and Keith, but for Eystein's
and Peck's benefit the emails copied below relate to McIntyre
downloading a PDF of a manuscript cited by the IPCC paleo chapter and
then apparently trying to interfere with the editorial process that
the paper is currently going through at JGR.

I think this is an abuse of McIntyre's position as an IPCC reviewer.

Rosanne replied to my email below, to say that they *do* want this
taken further. So...

Phil has agreed to forward these messages to Susan Solomon and Michael Manning.

Eystein and Peck: do you want to add anything too?

Cheers

Tim

>Date: Wed, 28 Sep 2005 09:08:22 +0100
>To: "Rob Wilson" , "Rosanne D'Arrigo"
>
>From: Tim Osborn
>Subject: Re: Fw: D'Arrigo et al, submitted
>Cc:
>
>Dear Rob and Rosanne,
>
>I strongly agree that this is an abuse of his position as IPCC
>reviewer! The data archiving issues are a separate issue because I
>think there's no need for the data you used to be publicly available
>until the paper is actually published, and I would hope that the
>editor would respond appropriately. But the other comments could
>clearly influence the editorial/review process and this is very
>unfair when your paper has already been reviewed by
>others. McIntyre could of course submit a comment after your paper
>was published if he wished to criticize certain aspects, and that is
>the route he should have followed. He tried to stop publication of
>a paper that I was a co-author on, Rutherford et al. (2005), by
>contacting the editor of J. Climate with various criticisms -
>fortunately the editor told him firmly that the route to take was to
>submit a comment after publication. However, in our case the paper
>was already in press. In your case, with the editor's decision
>still to be made, there is clearly more scope for McIntyre to
>influence the decision in your case - and this certainly should not happen.
>
>The conditions which McIntyre (and all other IPCC reviewers) agreed
>to before downloading your manuscript were:
>
>"This site also provides access to copies of some submitted,
>in-press, or otherwise unpublished papers and reports that are cited
>in the draft WG I report. All such material is made available only
>to support the review of the IPCC drafts. These works are not
>themselves subject to the IPCC review process and are not to be
>distributed, quoted or cited without prior permission from their
>original authors in each instance."
>
>I don't think that contacting the journal editor with criticisms is
>"only to support the review of the IPCC drafts".
>
>I will take this issue up with the chapter lead authors and the WG1
>technical support unit - unless you prefer that I didn't. Please let me know.
>
>Cheers
>
>Tim
>
>At 08:33 28/09/2005, Rob Wilson wrote:
>>Hi Tim and Keith,
>>please see the e-mail (below) from Steve Macintyre to the Editor of JGR.
>>
>>This seems a major abuse of his position as reviewer for IPCC?
>>
>>In some respects, I don't mind having to address his comments (many
>>of which are already adequately explained I think, although a
>>detailed list of all data used could certainly go in an
>>appendix), but this just seems a bit off. After all, we have
>>addressed the reviewers comments and are currently awaiting a
>>decision. This e-mail may effect the decision greatly.
>>
>>Is he going to do this for all papers he does not quite agree with.
>>
>>comments?
>>
>>Rob
>>
>>----------
>>
>>
>>>From: "Steve McIntyre"
>>><stephen.mcintyre@utoronto.ca>
>>>To: "Colin O'Dowd" <jgr@nuigalway.ie>
>>>Cc: "Rob Wilson"
>>><rjwilson_dendro@blueyonder.co.uk>,
>>> "Rosanne D'Arrigo"
>>> <druidrd@ldeo.columbia.edu>
>>>Subject: D'Arrigo et al, submitted
>>>Date: Tue, 27 Sep 2005 10:37:06 -0400
>>>Dear Dr O'Dowd,
>>>I am a reviewer for the IPCC Fourth Assessment Report (IPCC 4AR)
>>>and am writing in respect to a submission to your journal by
>>>D'Arrigo et al., entitled "On the Long-Term Context for Late 20th
>>>Century Warming." This article was referenced in chapter 6 of the
>>>Draft IPCC 4AR and made available to IPCC reviewers. In the course
>>>of my review, I contacted the senior author, Dr. D'Arrigo, for the
>>>FTP location of the data used in this article or for alternative
>>>access to the data. Dr D'Arrigo categorically refused and I was
>>>referred to the journal editor if I desired recourse.
>>>
>>>
>>>Data Citation and Archiving
>>>I point out that AGU policies for data citation and data archiving
>>>(http://www.agu.org/pubs/data_policy.html
>>>) specifically require that authors provide data citation
>>>according to AGU standards and require that contributors archive
>>>data in permanent archives, such as the World Data Center for
>>>Paleoclimatology. For example, the policy states:
>>>
>>>
>>>1. Data sets cited in AGU publications must meet the same type of
>>>standards for public access and long-term availability as are
>>>applied to citations to the scientific literature. Thus data cited
>>>in AGU publications must be permanently archived in a data center …
>>>2. Data sets that are available only from the author, through
>>>miscellaneous public network services, or academic, government or
>>>commercial institutions not chartered specifically for archiving
>>>data, may not be cited in AGU publications.
>>>
>>>
>>>On page 21 of D'Arrigo et al., there is a listing of "regional
>>>groupings" of data. In some cases, part of the data is archived at
>>>WDCP; in other cases, the data has been collected by the authors,
>>>but has not been archived.
>>>
>>>
>>>In cases, where the data has been archived, it has not been cited
>>>according to AGU policies. For example, the Torntraesk site is
>>>presumably swed019w, but this is not stated. The Polar Urals site
>>>appears to be a combination of russ021w, russ176w and russ022w,
>>>but this is not stated. The Quebec site appears to be a version of
>>>cana036, but a version that differs from the one archived, as it
>>>includes more series. The "Mongolia" site appears to be the
>>>authors' mong003 site, but a different version than the one
>>>archived (which commences at a different date). The "Yukon" series
>>>is a combination of two sites, which are not stated. At least one
>>>of the sites is a different version from the one archived. The
>>>Icefields site is again a different version than the one archived.
>>>Other data sets e.g. Seward, NW North America, Central Alaska,
>>>Wrangells, Coast Alaska, Central NWT, Southern Alaska, have been
>>>collected by the authors and are either not archived at all or
>>>archived in obsolete versions.
>>>
>>>
>>>In order that this submission comply with AGU policies on data
>>>archiving, I request that you require D'Arrigo et al. do (1)
>>>provide accurate data citations complying with AGU policies for
>>>all data sets presently archived at WDCP; (2) archive all "grey"
>>>data used in the article.
>>>
>>>
>>>Methodology
>>>The results of this article depend on methodological details,
>>>especially as to standardization procedures. However, these
>>>procedures are not described in objective or operational terms. I
>>>will illustrate some examples below:
>>> Page 21 – "In select cases, a power transform (PT) was applied
>>> to correct for data biases. This bias was assessed by correlation
>>> and residual analysis against both local and large scale
>>> temperature series." In which cases was PT applied and what were
>>> the objective criteria in the correlation and residual analysis,
>>> which were used to determine whether this should be applied.
>>>
>>>
>>>
>>>Page 21 – "Due to differing populations in the TR data, the
>>>data-sets were often grouped into 'common' populations. No one
>>>strategy is appropriate for all data-sets and careful evaluation
>>>of each composite data-set was made." That's nice, but what were
>>>the operational criteria which were used to allocate each case to
>>>the 5 different alternative procedures.
>>>
>>>
>>>Page 7 – "The standard error of the regression estimate (standard
>>>deviation of the regression residuals) from the full period
>>>calibration was used to generate the 2 sigma error bars and this
>>>was also adjusted (inflated) to account for the change (decrease)
>>>in explained variance in each nest." – The last adjustment is not
>>>described in operational terms. Shouldn't the standard error be
>>>realistically measured by the standard deviation from the
>>>verification period residuals?
>>>
>>>
>>>Page 20. "Successful modeling of paleoclimate data with the high
>>>temperatures of the late 1990s is essential if we are to make
>>>robust, definitive conclusions about past temperature amplitudes
>>>and variability." Abstract – "presently-available paleoclimatic
>>>reconstructions are inadequate for making specific inferences, at
>>>hemispheric scales, about MWP warmth relative to the anthropogenic
>>>period and that such comparisons can only still be made at the
>>>local/regional scale." Page 13. "After this period [mid-1980s],
>>>the divergence between the tree-ring and instrumental data results
>>>in weakening of calibration results and failed verification
>>>statistics". The authors contradict these caveats by proceeding to
>>>make a variety of inferences and claims "at hemispheric scales"
>>>about MWP warmth or lack thereof relative to the modern period. A
>>>comparison of their reconstruction to instrumental temperatures is
>>>prominently made in the Abstract, on page 10 and page 14. If the
>>>reconstructions are inadequate for making these inferences, then
>>>don't make them.
>>>
>>>
>>>Thank you for your consideration,
>>>
>>>
>>>Yours truly,
>>>Stephen McIntyre
>>>

Dr Timothy J Osborn
Climatic Research Unit
School of Environmental Sciences, University of East Anglia
Norwich NR4 7TJ, UK

e-mail: t.osborn@uea.ac.uk
phone: +44 1603 592089
fax: +44 1603 507784
web: http://www.cru.uea.ac.uk/~timo/
sunclock: http://www.cru.uea.ac.uk/~timo/sunclock.htm